PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_16144
Common NameKK1_016619
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 272aa    MW: 30827.3 Da    PI: 8.4576
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_16144genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.19.2e-183483255
            AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   +y GVr++  +g+WvAeI+d +   ++ r +lg++ taeeAa+a+++a+  l+g
  C.cajan_16144 34 KYVGVRQRA-SGKWVAEIKDTT---QKIRMWLGTYETAEEAARAYDEAACLLRG 83
                   8*****999.7*********32...35**********************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003804.1E-343497IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-273490IPR001471AP2/ERF domain
PROSITE profilePS5103219.3883491IPR001471AP2/ERF domain
SuperFamilySSF541712.68E-193492IPR016177DNA-binding domain
PfamPF008471.1E-123483IPR001471AP2/ERF domain
CDDcd000182.46E-313490No hitNo description
PRINTSPR003671.3E-73546IPR001471AP2/ERF domain
PRINTSPR003671.3E-75773IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MEIQFQHPKQ HLKPNKSSKG GKLKGRKNNR NKNKYVGVRQ RASGKWVAEI KDTTQKIRMW  60
LGTYETAEEA ARAYDEAACL LRGSNTRTNF LTRVSLDSPL ASRIQNLLNT RKGSKTKQHE  120
QDAQTCATRK KRRVNNTSSS SSTSSNSANS SNSETCEYSL SSETTTQHTQ LFDDAYRPDL  180
SDFMESESGS EKNPSWGFEA VFDRFPFKQV MDIANLPDLD GLELPEFERM KVERQISASL  240
YAMNGVQEYM DTVQDSNSES LWDLSPLCSF LC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A3e-133595667ATERF1
2gcc_A3e-133595667ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0923441e-104BT092344.1 Soybean clone JCVI-FLGm-15F24 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014498297.11e-136PREDICTED: ethylene-responsive transcription factor RAP2-11-like
TrEMBLA0A151T4X90.0A0A151T4X9_CAJCA; Ethylene-responsive transcription factor RAP2-11
STRINGGLYMA16G27040.11e-123(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33413069
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.19e-23related to AP2 11